Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC6P09630 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC6P09630 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 AC068867.1-201ENST00000559855 150 ntBASIC16.37■□□□□ 0.21
HOXC6P09630 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 MIR4472-1-201ENST00000584349 80 ntBASIC16.37■□□□□ 0.21
HOXC6P09630 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.37■□□□□ 0.21
HOXC6P09630 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC6P09630 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
HOXC6P09630 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC6P09630 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
HOXC6P09630 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC6P09630 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC6P09630 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 AC006372.4-201ENST00000624122 1543 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC6P09630 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC6P09630 AC024293.1-201ENST00000467930 498 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC6P09630 OR5BD1P-201ENST00000532527 817 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC6P09630 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 SIGLEC22P-201ENST00000599104 714 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.36■□□□□ 0.21
HOXC6P09630 AC006158.1-201ENST00000610661 249 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 AC244250.3-201ENST00000620749 366 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HOXC6P09630 TEKT4P2-202ENST00000559466 1312 ntBASIC16.36■□□□□ 0.21
HOXC6P09630 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC6P09630 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HOXC6P09630 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HOXC6P09630 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC6P09630 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC6P09630 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC6P09630 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 BRD7P5-201ENST00000299197 1822 ntBASIC16.35■□□□□ 0.21
HOXC6P09630 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC6P09630 RN7SKP109-201ENST00000410592 316 ntBASIC16.35■□□□□ 0.21
HOXC6P09630 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC6P09630 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC6P09630 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC6P09630 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 AC140658.4-201ENST00000561990 352 ntBASIC16.35■□□□□ 0.21
HOXC6P09630 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 AC073592.2-201ENST00000623062 780 ntBASIC16.35■□□□□ 0.21
HOXC6P09630 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC6P09630 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HOXC6P09630 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms