Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGC4Q9Y5F7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AC099063.4-201ENST00000641099 1602 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AL157407.1-201ENST00000435784 904 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 POM121L10P-201ENST00000436994 1285 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 KRT8P29-201ENST00000420409 1371 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 TMBIM7P-202ENST00000641474 1516 ntBASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGC4Q9Y5F7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AL645933.1-201ENST00000440087 609 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 MIR6869-201ENST00000619434 62 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 MIR6799-201ENST00000620297 69 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AL008638.5-201ENST00000623814 1298 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 Z98259.2-201ENST00000641583 609 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 AL008718.2-201ENST00000609206 1313 ntBASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGC4Q9Y5F7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms