Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 MIR1908-201ENST00000410394 80 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AL157407.1-201ENST00000435784 904 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AC012441.2-201ENST00000444843 739 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 TUBB8P8-201ENST00000458717 1058 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 FAM8A2P-201ENST00000528813 1142 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 SORD2P-201ENST00000558556 1069 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AL023803.2-201ENST00000620080 638 ntBASIC15.19■□□□□ 0.02
HAPLN3Q96S86 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HAPLN3Q96S86 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 POM121L10P-201ENST00000436994 1285 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AL645933.1-201ENST00000440087 609 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AC027237.1-201ENST00000560942 655 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 AC009884.2-201ENST00000603110 324 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 MIR6799-201ENST00000620297 69 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 DGCR9-201ENST00000609630 2415 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 MYO15B-237ENST00000642007 4893 ntBASIC15.18■□□□□ 0.02
HAPLN3Q96S86 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HAPLN3Q96S86 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms