Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC009884.2-201ENST00000603110 324 ntBASIC12.89□□□□□ -0.35
TMEM54Q969K7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 GK-202ENST00000378941 458 ntTSL 3 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 Z93015.1-201ENST00000451718 390 ntBASIC12.88□□□□□ -0.35
TMEM54Q969K7 RPSAP36-202ENST00000494591 1261 ntBASIC12.88□□□□□ -0.35
TMEM54Q969K7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RN7SL560P-201ENST00000577943 264 ntBASIC12.88□□□□□ -0.35
TMEM54Q969K7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 REXO1L6P-201ENST00000603433 1515 ntBASIC12.88□□□□□ -0.35
TMEM54Q969K7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM54Q969K7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM54Q969K7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 LINC01230-201ENST00000625222 3017 ntBASIC12.87□□□□□ -0.35
TMEM54Q969K7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AL583810.1-201ENST00000553344 1045 ntBASIC12.87□□□□□ -0.35
TMEM54Q969K7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms