Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 OR10B1P-201ENST00000601666 907 ntBASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 MIR6805-201ENST00000615055 62 ntBASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AL162274.1-201ENST00000617191 1098 ntBASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC138951.2-201ENST00000623455 1161 ntBASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 AL139385.1-201ENST00000611744 3272 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 MIR1909-201ENST00000411312 80 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 AC026954.1-201ENST00000429771 1293 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 RPS2P32-201ENST00000439199 892 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 CTBP2P5-201ENST00000454986 1264 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 FTLP10-202ENST00000505798 471 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 MIR4683-201ENST00000579659 81 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 MIR6775-201ENST00000617557 69 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 BX640514.1-201ENST00000583223 1918 ntBASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SIMC1Q8NDZ2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIMC1Q8NDZ2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms