Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 AL451050.2-201ENST00000606967 682 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 ENPP7P14-201ENST00000621765 1040 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 CU633904.3-201ENST00000624042 1029 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 AC138627.1-207ENST00000641560 1006 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-1P78426 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
NKX6-1P78426 WASH3P-207ENST00000560956 1394 ntBASIC13.06□□□□□ -0.32
NKX6-1P78426 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-1P78426 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-1P78426 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 KRT8P19-201ENST00000551916 1455 ntBASIC13.05□□□□□ -0.32
NKX6-1P78426 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC245884.6-201ENST00000515672 1067 ntBASIC13.05□□□□□ -0.32
NKX6-1P78426 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.05□□□□□ -0.32
NKX6-1P78426 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 MIR4722-201ENST00000578292 60 ntBASIC13.05□□□□□ -0.32
NKX6-1P78426 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-1P78426 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-1P78426 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 LINC00528-201ENST00000600723 2160 ntBASIC13.05□□□□□ -0.32
NKX6-1P78426 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-1P78426 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.05□□□□□ -0.32
NKX6-1P78426 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-1P78426 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AC055811.4-201ENST00000624039 1754 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AL109954.1-202ENST00000564051 2148 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms