Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC5P40937 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC5P40937 AHCYP4-201ENST00000419201 1315 ntBASIC16.18■□□□□ 0.18
RFC5P40937 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC5P40937 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RFC5P40937 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RFC5P40937 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.17■□□□□ 0.18
RFC5P40937 KRT18P36-201ENST00000411618 1276 ntBASIC16.17■□□□□ 0.18
RFC5P40937 AC010740.1-201ENST00000417035 684 ntBASIC16.17■□□□□ 0.18
RFC5P40937 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 AC003686.1-201ENST00000550956 1034 ntBASIC16.17■□□□□ 0.18
RFC5P40937 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.17■□□□□ 0.18
RFC5P40937 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 RN7SL774P-201ENST00000577467 290 ntBASIC16.17■□□□□ 0.18
RFC5P40937 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 NAP1L6-202ENST00000641404 1222 ntBASIC16.17■□□□□ 0.18
RFC5P40937 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC5P40937 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFC5P40937 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC5P40937 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFC5P40937 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 AL157791.1-201ENST00000553667 1699 ntBASIC16.16■□□□□ 0.18
RFC5P40937 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFC5P40937 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFC5P40937 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 XBP1P1-201ENST00000436573 652 ntBASIC16.16■□□□□ 0.18
RFC5P40937 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC5P40937 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC5P40937 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC5P40937 SORD2P-201ENST00000558556 1069 ntBASIC16.16■□□□□ 0.18
RFC5P40937 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
RFC5P40937 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 MIR6074-201ENST00000612054 107 ntBASIC16.16■□□□□ 0.18
RFC5P40937 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.16■□□□□ 0.18
RFC5P40937 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC5P40937 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 AC139749.1-202ENST00000617529 3139 ntBASIC16.16■□□□□ 0.18
RFC5P40937 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RFC5P40937 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC5P40937 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms