Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRIM23P36406 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.41□□□□□ -0.1
TRIM23P36406 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM23P36406 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM23P36406 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 AC012618.1-201ENST00000461223 412 ntBASIC14.41□□□□□ -0.1
TRIM23P36406 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM23P36406 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TRIM23P36406 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 KRT8P21-201ENST00000430398 1491 ntBASIC14.41□□□□□ -0.1
TRIM23P36406 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.41□□□□□ -0.1
TRIM23P36406 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM23P36406 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM23P36406 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 AC018629.1-201ENST00000623381 1736 ntBASIC14.41□□□□□ -0.1
TRIM23P36406 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 AC239868.1-201ENST00000369385 493 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM23P36406 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM23P36406 ISCA2P1-201ENST00000425548 448 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 AL133466.1-201ENST00000447582 150 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 RN7SL769P-201ENST00000469386 295 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM23P36406 PGAM1P5-201ENST00000548011 764 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 RN7SL574P-201ENST00000581512 297 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 AC092299.1-201ENST00000632679 757 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRIM23P36406 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 FLJ16779-201ENST00000612722 7638 ntBASIC14.4□□□□□ -0.1
TRIM23P36406 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM23P36406 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM23P36406 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM23P36406 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
TRIM23P36406 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms