Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 AL139094.1-201ENST00000405549 1188 ntBASIC13.94□□□□□ -0.18
NCK1P16333 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 CNN2P11-201ENST00000429351 262 ntBASIC13.94□□□□□ -0.18
NCK1P16333 AC007969.1-201ENST00000433675 447 ntBASIC13.94□□□□□ -0.18
NCK1P16333 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 AC069120.2-201ENST00000524091 540 ntBASIC13.94□□□□□ -0.18
NCK1P16333 ZNF890P-202ENST00000530367 1156 ntBASIC13.94□□□□□ -0.18
NCK1P16333 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AC138969.2-201ENST00000532739 9932 ntBASIC13.94□□□□□ -0.18
NCK1P16333 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.93□□□□□ -0.18
NCK1P16333 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NCK1P16333 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.93□□□□□ -0.18
NCK1P16333 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 AC092580.3-201ENST00000430932 139 ntBASIC13.93□□□□□ -0.18
NCK1P16333 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.93□□□□□ -0.18
NCK1P16333 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NCK1P16333 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.93□□□□□ -0.18
NCK1P16333 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 AL662799.1-202ENST00000614205 422 ntBASIC13.93□□□□□ -0.18
NCK1P16333 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.93□□□□□ -0.18
NCK1P16333 PRSS30P-206ENST00000641773 873 ntBASIC13.93□□□□□ -0.18
NCK1P16333 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCK1P16333 AC114271.1-201ENST00000612689 2813 ntBASIC13.93□□□□□ -0.18
NCK1P16333 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
NCK1P16333 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCK1P16333 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms