Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
UBL4AP11441 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBL4AP11441 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 AC092933.1-201ENST00000393644 945 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.69□□□□□ -0.22
UBL4AP11441 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.69□□□□□ -0.22
UBL4AP11441 MESTP3-201ENST00000503460 968 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 FTLP10-202ENST00000505798 471 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.69□□□□□ -0.22
UBL4AP11441 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 AC005225.4-201ENST00000557330 545 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 BTNL10-201ENST00000595971 695 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.69□□□□□ -0.22
UBL4AP11441 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 AC132938.4-201ENST00000623835 848 ntBASIC13.69□□□□□ -0.22
UBL4AP11441 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.69□□□□□ -0.22
UBL4AP11441 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.69□□□□□ -0.22
UBL4AP11441 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
UBL4AP11441 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBL4AP11441 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.68□□□□□ -0.22
UBL4AP11441 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBL4AP11441 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.68□□□□□ -0.22
UBL4AP11441 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBL4AP11441 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 KRT43P-201ENST00000434019 910 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 AC022447.6-201ENST00000515522 438 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.68□□□□□ -0.22
UBL4AP11441 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.68□□□□□ -0.22
UBL4AP11441 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 ECM1P1-201ENST00000604092 1279 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 LINC02084-201ENST00000606069 1096 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 AC138696.2-201ENST00000607376 223 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 AC012645.4-201ENST00000610691 1061 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBL4AP11441 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 AL354702.1-201ENST00000442006 1960 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 AC092135.3-201ENST00000624151 1846 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 AC011840.2-201ENST00000563063 1520 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 AL136172.1-201ENST00000598590 1394 ntBASIC13.68□□□□□ -0.22
UBL4AP11441 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.68□□□□□ -0.22
UBL4AP11441 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBL4AP11441 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBL4AP11441 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.68□□□□□ -0.22
UBL4AP11441 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.68□□□□□ -0.22
UBL4AP11441 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms