Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 RN7SKP294-201ENST00000362770 338 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 Y_RNA.86-201ENST00000363020 111 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC087752.1-201ENST00000391360 558 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MTCO1P56-201ENST00000401674 224 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU2-8P-201ENST00000410727 190 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL117329.2-201ENST00000413815 740 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC073136.2-201ENST00000417282 849 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LRTOMT-205ENST00000423494 1270 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PAICSP3-201ENST00000428007 1168 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC008072.1-201ENST00000434254 824 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC010745.1-201ENST00000444804 637 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR52E7P-201ENST00000452394 933 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC105918.1-201ENST00000474399 838 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC022447.3-201ENST00000506865 495 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MRPS35P2-201ENST00000508242 191 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 GATB-205ENST00000508611 605 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC010486.1-201ENST00000511793 424 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MOK-223ENST00000522534 796 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR4A3P-201ENST00000532193 871 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PRR13P3-201ENST00000603578 376 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 WBP1LP12-201ENST00000604449 331 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC017048.3-201ENST00000608775 813 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL592494.3-201ENST00000609485 464 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 OR8G3P-202ENST00000641572 1255 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms