Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 MIR326-201ENST00000362220 95 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 GAPDHP21-201ENST00000450301 1010 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 CROCCP4-201ENST00000457096 498 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AC132192.2-201ENST00000596206 1147 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AC012645.4-201ENST00000610691 1061 ntBASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
PDLIM5Q96HC4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 AC005252.3-201ENST00000623855 2258 ntBASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 KLF2P4-201ENST00000451959 1225 ntBASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms