Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 AL008718.2-201ENST00000609206 1313 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 HSPA8P5-201ENST00000456928 2069 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 KLF2P1-201ENST00000447438 1042 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 HSPB1P2-201ENST00000448722 546 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 AC009542.2-202ENST00000619004 1067 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 Z98259.2-201ENST00000641583 609 ntBASIC12.9□□□□□ -0.34
TMEM54Q969K7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM54Q969K7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM54Q969K7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM54Q969K7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TMEM54Q969K7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.9□□□□□ -0.35
TMEM54Q969K7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TMEM54Q969K7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 MTX1P1-201ENST00000440904 838 ntBASIC12.89□□□□□ -0.35
TMEM54Q969K7 AC012441.2-201ENST00000444843 739 ntBASIC12.89□□□□□ -0.35
TMEM54Q969K7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.89□□□□□ -0.35
TMEM54Q969K7 RBM8B-201ENST00000555532 525 ntBASIC12.89□□□□□ -0.35
TMEM54Q969K7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms