Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LAP3P2-201ENST00000454686 1454 ntBASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AC018442.1-201ENST00000421439 2061 ntBASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AGAP7P-201ENST00000582299 2062 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AGAP14-201ENST00000624701 2060 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC018638.5-201ENST00000450885 754 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 KRT18P66-201ENST00000452970 1269 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ALG1L6P-201ENST00000515248 758 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 OR5BD1P-201ENST00000532527 817 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC005586.2-201ENST00000563946 837 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 MIR6756-201ENST00000616240 63 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC138466.5-201ENST00000624002 808 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC127024.7-201ENST00000625101 200 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC009145.4-201ENST00000625119 1294 ntBASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS4Q8IUM7 AC008741.2-201ENST00000612792 3115 ntBASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AC006372.4-201ENST00000624122 1543 ntBASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AL357563.1-201ENST00000404728 395 ntBASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 RN7SKP109-201ENST00000410592 316 ntBASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AC098934.1-203ENST00000442868 1262 ntBASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 LINC01922-201ENST00000562582 719 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms