Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AC004870.1-201ENST00000315132 882 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AC074386.1-202ENST00000463561 864 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 PDPK2P-202ENST00000562415 1191 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AC018845.2-201ENST00000568326 409 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AP001005.1-201ENST00000571755 1248 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AC064836.3-201ENST00000607928 673 ntBASIC12.28□□□□□ -0.44
ZNF546Q86UE3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 MKRN5P-201ENST00000445263 1467 ntBASIC12.27□□□□□ -0.44
ZNF546Q86UE3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.27□□□□□ -0.44
ZNF546Q86UE3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.27□□□□□ -0.44
ZNF546Q86UE3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 MIR1224-201ENST00000408193 85 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC142381.1-201ENST00000426099 345 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC079781.3-201ENST00000449110 356 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AP002472.1-201ENST00000577490 586 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC027307.2-201ENST00000591252 911 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 AC099522.2-201ENST00000607001 744 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 PTPRVP-205ENST00000641549 5067 ntBASIC12.27□□□□□ -0.45
ZNF546Q86UE3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF546Q86UE3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms