Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 TSPY26P-202ENST00000565928 3884 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AC069224.1-201ENST00000566372 1715 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 FUCA1P1-201ENST00000374476 1351 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO4Q2I0M5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 MIR645-201ENST00000385283 94 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AL121949.3-201ENST00000406684 385 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AHCYP3-201ENST00000420053 1279 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AL512599.1-201ENST00000430724 685 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC105917.1-201ENST00000506637 2539 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 WASH3P-207ENST00000560956 1394 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 AC144831.1-201ENST00000573312 2656 ntBASIC14.08□□□□□ -0.16
RSPO4Q2I0M5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 RN7SL665P-201ENST00000578793 300 ntBASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 BX088702.1-201ENST00000610784 235 ntBASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms