Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PMS1P54277 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 COX5BP8-201ENST00000416911 349 ntBASIC16.16■□□□□ 0.18
PMS1P54277 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.16■□□□□ 0.18
PMS1P54277 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.16■□□□□ 0.18
PMS1P54277 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PMS1P54277 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.16■□□□□ 0.18
PMS1P54277 AC006453.4-201ENST00000636949 1252 ntBASIC16.16■□□□□ 0.18
PMS1P54277 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.16■□□□□ 0.18
PMS1P54277 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.16■□□□□ 0.18
PMS1P54277 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
PMS1P54277 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PMS1P54277 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.15■□□□□ 0.18
PMS1P54277 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.15■□□□□ 0.18
PMS1P54277 C2orf27AP3-201ENST00000434123 579 ntBASIC16.15■□□□□ 0.18
PMS1P54277 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.15■□□□□ 0.18
PMS1P54277 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 CICP12-201ENST00000455801 843 ntBASIC16.15■□□□□ 0.18
PMS1P54277 AC007551.1-201ENST00000457394 519 ntBASIC16.15■□□□□ 0.18
PMS1P54277 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PMS1P54277 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.15■□□□□ 0.18
PMS1P54277 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PMS1P54277 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.15■□□□□ 0.18
PMS1P54277 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PMS1P54277 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 AL022328.1-201ENST00000610050 478 ntBASIC16.15■□□□□ 0.18
PMS1P54277 AL354718.3-201ENST00000616414 581 ntBASIC16.15■□□□□ 0.18
PMS1P54277 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 AC138951.2-201ENST00000623455 1161 ntBASIC16.15■□□□□ 0.18
PMS1P54277 CR382287.1-201ENST00000623954 586 ntBASIC16.15■□□□□ 0.18
PMS1P54277 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.15■□□□□ 0.18
PMS1P54277 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PMS1P54277 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.15■□□□□ 0.18
PMS1P54277 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PMS1P54277 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
PMS1P54277 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
PMS1P54277 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
PMS1P54277 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.18
PMS1P54277 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.14■□□□□ 0.17
PMS1P54277 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PMS1P54277 ARSEP1-201ENST00000420443 635 ntBASIC16.14■□□□□ 0.17
PMS1P54277 AC016694.1-201ENST00000434179 700 ntBASIC16.14■□□□□ 0.17
PMS1P54277 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.14■□□□□ 0.17
PMS1P54277 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 AC027307.3-201ENST00000594262 1100 ntBASIC16.14■□□□□ 0.17
PMS1P54277 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms