Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 RBM8B-201ENST00000555532 525 ntBASIC14.73□□□□□ -0.05
MMP2P08253 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.73□□□□□ -0.05
MMP2P08253 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
MMP2P08253 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.73□□□□□ -0.05
MMP2P08253 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.73□□□□□ -0.05
MMP2P08253 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 AC144522.1-201ENST00000625111 1658 ntBASIC14.73□□□□□ -0.05
MMP2P08253 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.73□□□□□ -0.05
MMP2P08253 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MMP2P08253 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
MMP2P08253 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MMP2P08253 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.73□□□□□ -0.05
MMP2P08253 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP2P08253 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 VDAC1P1-201ENST00000439229 848 ntBASIC14.72□□□□□ -0.05
MMP2P08253 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 AC006122.1-201ENST00000493323 440 ntBASIC14.72□□□□□ -0.05
MMP2P08253 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.72□□□□□ -0.05
MMP2P08253 AC104982.3-201ENST00000581995 514 ntBASIC14.72□□□□□ -0.05
MMP2P08253 AC009884.2-201ENST00000603110 324 ntBASIC14.72□□□□□ -0.05
MMP2P08253 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MMP2P08253 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP2P08253 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
MMP2P08253 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP2P08253 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
MMP2P08253 KRT8P29-201ENST00000420409 1371 ntBASIC14.72□□□□□ -0.05
MMP2P08253 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP2P08253 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.71□□□□□ -0.05
MMP2P08253 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.71□□□□□ -0.05
MMP2P08253 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
MMP2P08253 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.71□□□□□ -0.05
MMP2P08253 RPL18P13-201ENST00000478088 569 ntBASIC14.71□□□□□ -0.05
MMP2P08253 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.71□□□□□ -0.05
MMP2P08253 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.71□□□□□ -0.05
MMP2P08253 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 BNIP3P13-201ENST00000599968 566 ntBASIC14.71□□□□□ -0.05
MMP2P08253 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MMP2P08253 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP2P08253 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
MMP2P08253 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms