Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 BTBD6P1-201ENST00000412176 1267 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AL157407.1-201ENST00000435784 904 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC100827.2-201ENST00000563214 1194 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC005730.2-201ENST00000564549 1184 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AL096828.3-201ENST00000615354 462 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC152010.1-201ENST00000415779 2006 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC117489.1-201ENST00000625169 3217 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 LINC01230-201ENST00000625222 3017 ntBASIC15.77■□□□□ 0.12
HLA-DRAP01903 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 TUBB1P2-201ENST00000422712 1306 ntBASIC15.77■□□□□ 0.12
HLA-DRAP01903 TUBB1P1-201ENST00000503144 1300 ntBASIC15.77■□□□□ 0.12
HLA-DRAP01903 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.77■□□□□ 0.12
HLA-DRAP01903 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DRAP01903 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 AL033527.4-201ENST00000641026 673 ntBASIC15.77■□□□□ 0.12
HLA-DRAP01903 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRAP01903 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 AC027601.5-201ENST00000624065 2482 ntBASIC15.77■□□□□ 0.11
HLA-DRAP01903 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HLA-DRAP01903 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HLA-DRAP01903 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DRAP01903 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DRAP01903 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DRAP01903 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
HLA-DRAP01903 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms