Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PDGFBP01127 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFBP01127 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
PDGFBP01127 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.52□□□□□ -0.08
PDGFBP01127 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFBP01127 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFBP01127 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFBP01127 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.52□□□□□ -0.08
PDGFBP01127 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PDGFBP01127 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFBP01127 FKBP4P8-201ENST00000610931 1369 ntBASIC14.52□□□□□ -0.08
PDGFBP01127 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.52□□□□□ -0.08
PDGFBP01127 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFBP01127 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFBP01127 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFBP01127 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.52□□□□□ -0.08
PDGFBP01127 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PDGFBP01127 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDGFBP01127 AL080243.1-201ENST00000423293 1060 ntBASIC14.52□□□□□ -0.09
PDGFBP01127 ASS1P2-201ENST00000439895 1223 ntBASIC14.52□□□□□ -0.09
PDGFBP01127 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.52□□□□□ -0.09
PDGFBP01127 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFBP01127 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.52□□□□□ -0.09
PDGFBP01127 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 AC008894.3-201ENST00000624324 3103 ntBASIC14.52□□□□□ -0.09
PDGFBP01127 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFBP01127 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFBP01127 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFBP01127 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 OR7E115P-201ENST00000382617 1024 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 OR10N1P-201ENST00000392758 869 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.51□□□□□ -0.09
PDGFBP01127 KRT18P4-201ENST00000422599 1288 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.51□□□□□ -0.09
PDGFBP01127 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 RN7SL147P-201ENST00000487345 298 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 RN7SL767P-201ENST00000493013 295 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms