Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 ABCD1P2-201ENST00000429313 1601 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK1BO75841 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UPK1BO75841 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 PRSS29P-201ENST00000440800 595 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
UPK1BO75841 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 MIR3180-1-201ENST00000580374 94 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 MIR3180-3-201ENST00000584616 94 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK1BO75841 AC009955.4-201ENST00000597192 544 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 AL356488.2-201ENST00000602755 427 ntBASIC12.8□□□□□ -0.36
UPK1BO75841 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.8□□□□□ -0.36
UPK1BO75841 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK1BO75841 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
UPK1BO75841 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK1BO75841 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.79□□□□□ -0.36
UPK1BO75841 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
UPK1BO75841 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 STRCP1-201ENST00000509801 5328 ntBASIC12.79□□□□□ -0.36
UPK1BO75841 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 AL928654.5-201ENST00000624831 2501 ntBASIC12.79□□□□□ -0.36
UPK1BO75841 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK1BO75841 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 AL596275.1-201ENST00000423464 877 ntBASIC12.79□□□□□ -0.36
UPK1BO75841 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.79□□□□□ -0.36
UPK1BO75841 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK1BO75841 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms