Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
HFM1A2PYH4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HFM1A2PYH4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21.32■■□□□ 1
HFM1A2PYH4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.32■■□□□ 1
HFM1A2PYH4 KRT18P15-201ENST00000458108 1291 ntBASIC21.32■■□□□ 1
HFM1A2PYH4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC21.32■■□□□ 1
HFM1A2PYH4 IGLV3-15-201ENST00000518356 244 ntBASIC21.32■■□□□ 1
HFM1A2PYH4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC21.32■■□□□ 1
HFM1A2PYH4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.32■■□□□ 1
HFM1A2PYH4 AC018635.2-201ENST00000608625 364 ntBASIC21.32■■□□□ 1
HFM1A2PYH4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.32■■□□□ 1
HFM1A2PYH4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC21.32■■□□□ 1
HFM1A2PYH4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 GOLGA8VP-201ENST00000559009 1798 ntBASIC21.32■■□□□ 1
HFM1A2PYH4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HFM1A2PYH4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HFM1A2PYH4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HFM1A2PYH4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.31■■□□□ 1
HFM1A2PYH4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 AC005632.3-201ENST00000605544 308 ntBASIC21.31■■□□□ 1
HFM1A2PYH4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 CICP16-201ENST00000502609 2813 ntBASIC21.31■■□□□ 1
HFM1A2PYH4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HFM1A2PYH4 AC099063.4-201ENST00000641099 1602 ntBASIC21.31■■□□□ 1
HFM1A2PYH4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.31■■□□□ 1
HFM1A2PYH4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HFM1A2PYH4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HFM1A2PYH4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.3■■□□□ 1
HFM1A2PYH4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.3■■□□□ 1
HFM1A2PYH4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.3■■□□□ 1
HFM1A2PYH4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC21.3■■□□□ 1
HFM1A2PYH4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.3■■□□□ 1
HFM1A2PYH4 MIR4522-201ENST00000584932 87 ntBASIC21.3■■□□□ 1
HFM1A2PYH4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC21.3■■□□□ 1
HFM1A2PYH4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 AC092978.1-202ENST00000637590 1327 ntBASIC21.3■■□□□ 1
HFM1A2PYH4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.3■■□□□ 1
HFM1A2PYH4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HFM1A2PYH4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 AC026316.1-201ENST00000398900 414 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 AC073869.2-201ENST00000417338 1026 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.29■■□□□ 1
HFM1A2PYH4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 MIR5572-201ENST00000583188 137 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms