Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3Q9UBI1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3Q9UBI1 AL137060.1-201ENST00000618151 2648 ntBASIC20■□□□□ 0.79
COMMD3Q9UBI1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3Q9UBI1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3Q9UBI1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3Q9UBI1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COMMD3Q9UBI1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3Q9UBI1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 AC126177.7-201ENST00000547904 679 ntBASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3Q9UBI1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 LINC01971-201ENST00000617888 1048 ntBASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD3Q9UBI1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.97■□□□□ 0.79
COMMD3Q9UBI1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3Q9UBI1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3Q9UBI1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 AL162393.1-201ENST00000437852 946 ntBASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3Q9UBI1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms