Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 MIR6724-1-201ENST00000616420 92 ntBASIC19.22■□□□□ 0.67
RNF7Q9UBF6 MIR6724-2-201ENST00000616483 92 ntBASIC19.22■□□□□ 0.67
RNF7Q9UBF6 MIR6724-4-201ENST00000617390 92 ntBASIC19.22■□□□□ 0.67
RNF7Q9UBF6 MIR6724-3-201ENST00000622482 92 ntBASIC19.22■□□□□ 0.67
RNF7Q9UBF6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 AL356441.2-201ENST00000443009 864 ntBASIC19.21■□□□□ 0.67
RNF7Q9UBF6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF7Q9UBF6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF7Q9UBF6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF7Q9UBF6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF7Q9UBF6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF7Q9UBF6 AC093323.1-202ENST00000635031 2045 ntBASIC19.18■□□□□ 0.66
RNF7Q9UBF6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF7Q9UBF6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF7Q9UBF6 ABCB10P4-201ENST00000566803 2184 ntBASIC19.16■□□□□ 0.66
RNF7Q9UBF6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF7Q9UBF6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF7Q9UBF6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF7Q9UBF6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF7Q9UBF6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF7Q9UBF6 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF7Q9UBF6 AL356740.2-201ENST00000601559 647 ntBASIC19.13■□□□□ 0.65
RNF7Q9UBF6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RNF7Q9UBF6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF7Q9UBF6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF7Q9UBF6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms