Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMG20AQ9NP66 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMG20AQ9NP66 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms