Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20AQ9NP66 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.58■□□□□ 0.89
HMG20AQ9NP66 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20AQ9NP66 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20AQ9NP66 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HMG20AQ9NP66 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20AQ9NP66 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20AQ9NP66 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
HMG20AQ9NP66 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20AQ9NP66 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
HMG20AQ9NP66 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20AQ9NP66 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMG20AQ9NP66 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMG20AQ9NP66 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMG20AQ9NP66 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms