Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSL2Q9HCI7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 ABCB10P4-201ENST00000566803 2184 ntBASIC19.5■□□□□ 0.71
MSL2Q9HCI7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSL2Q9HCI7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 MIR6724-1-201ENST00000616420 92 ntBASIC19.49■□□□□ 0.71
MSL2Q9HCI7 MIR6724-2-201ENST00000616483 92 ntBASIC19.49■□□□□ 0.71
MSL2Q9HCI7 MIR6724-4-201ENST00000617390 92 ntBASIC19.49■□□□□ 0.71
MSL2Q9HCI7 MIR6724-3-201ENST00000622482 92 ntBASIC19.49■□□□□ 0.71
MSL2Q9HCI7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 ALDH1A3-203ENST00000557963 1670 ntBASIC19.49■□□□□ 0.71
MSL2Q9HCI7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSL2Q9HCI7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.48■□□□□ 0.71
MSL2Q9HCI7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 AC131212.1-201ENST00000613771 668 ntBASIC19.47■□□□□ 0.71
MSL2Q9HCI7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 AC093323.1-202ENST00000635031 2045 ntBASIC19.47■□□□□ 0.71
MSL2Q9HCI7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSL2Q9HCI7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 AC005703.6-201ENST00000623265 1329 ntBASIC19.46■□□□□ 0.71
MSL2Q9HCI7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.46■□□□□ 0.71
MSL2Q9HCI7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSL2Q9HCI7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms