Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.65■■□□□ 1.06
PIF1Q9H611 AC133552.2-201ENST00000619106 1032 ntBASIC21.65■■□□□ 1.06
PIF1Q9H611 C1orf229-201ENST00000623686 2258 ntBASIC21.65■■□□□ 1.06
PIF1Q9H611 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.65■■□□□ 1.06
PIF1Q9H611 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PIF1Q9H611 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PIF1Q9H611 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.65■■□□□ 1.06
PIF1Q9H611 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.64■■□□□ 1.06
PIF1Q9H611 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PIF1Q9H611 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.64■■□□□ 1.05
PIF1Q9H611 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.64■■□□□ 1.05
PIF1Q9H611 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PIF1Q9H611 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PIF1Q9H611 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PIF1Q9H611 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PIF1Q9H611 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.63■■□□□ 1.05
PIF1Q9H611 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PIF1Q9H611 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PIF1Q9H611 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PIF1Q9H611 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.63■■□□□ 1.05
PIF1Q9H611 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.63■■□□□ 1.05
PIF1Q9H611 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PIF1Q9H611 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PIF1Q9H611 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PIF1Q9H611 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.62■■□□□ 1.05
PIF1Q9H611 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.62■■□□□ 1.05
PIF1Q9H611 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.62■■□□□ 1.05
PIF1Q9H611 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PIF1Q9H611 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PIF1Q9H611 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.62■■□□□ 1.05
PIF1Q9H611 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PIF1Q9H611 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PIF1Q9H611 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
PIF1Q9H611 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PIF1Q9H611 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PIF1Q9H611 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
PIF1Q9H611 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PIF1Q9H611 AC090877.2-201ENST00000558441 1738 ntBASIC21.6■■□□□ 1.05
PIF1Q9H611 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PIF1Q9H611 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.6■■□□□ 1.05
PIF1Q9H611 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.6■■□□□ 1.05
PIF1Q9H611 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PIF1Q9H611 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PIF1Q9H611 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.59■■□□□ 1.05
PIF1Q9H611 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PIF1Q9H611 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PIF1Q9H611 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.59■■□□□ 1.05
PIF1Q9H611 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.59■■□□□ 1.05
PIF1Q9H611 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PIF1Q9H611 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.58■■□□□ 1.05
PIF1Q9H611 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.58■■□□□ 1.05
PIF1Q9H611 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PIF1Q9H611 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PIF1Q9H611 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PIF1Q9H611 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PIF1Q9H611 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.58■■□□□ 1.05
PIF1Q9H611 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PIF1Q9H611 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
PIF1Q9H611 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PIF1Q9H611 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PIF1Q9H611 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PIF1Q9H611 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PIF1Q9H611 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PIF1Q9H611 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PIF1Q9H611 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PIF1Q9H611 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
PIF1Q9H611 RPS2P7-201ENST00000447334 885 ntBASIC21.57■■□□□ 1.04
PIF1Q9H611 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PIF1Q9H611 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
PIF1Q9H611 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PIF1Q9H611 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PIF1Q9H611 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PIF1Q9H611 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 ABHD17AP5-201ENST00000580133 923 ntBASIC21.56■■□□□ 1.04
PIF1Q9H611 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.56■■□□□ 1.04
PIF1Q9H611 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PIF1Q9H611 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PIF1Q9H611 LINC00565-201ENST00000562710 2331 ntBASIC21.56■■□□□ 1.04
PIF1Q9H611 DUSP8P3-201ENST00000399571 1760 ntBASIC21.56■■□□□ 1.04
PIF1Q9H611 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PIF1Q9H611 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PIF1Q9H611 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PIF1Q9H611 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PIF1Q9H611 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PIF1Q9H611 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PIF1Q9H611 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms