Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCXQ9H320 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
VCXQ9H320 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCXQ9H320 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
VCXQ9H320 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VCXQ9H320 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.72■■□□□ 1.07
VCXQ9H320 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCXQ9H320 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
VCXQ9H320 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCXQ9H320 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCXQ9H320 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCXQ9H320 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCXQ9H320 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.71■■□□□ 1.07
VCXQ9H320 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
VCXQ9H320 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.7■■□□□ 1.06
VCXQ9H320 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.7■■□□□ 1.06
VCXQ9H320 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.7■■□□□ 1.06
VCXQ9H320 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.7■■□□□ 1.06
VCXQ9H320 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 RNF165-205ENST00000588679 2904 ntBASIC21.7■■□□□ 1.06
VCXQ9H320 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCXQ9H320 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCXQ9H320 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCXQ9H320 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCXQ9H320 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.69■■□□□ 1.06
VCXQ9H320 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCXQ9H320 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.69■■□□□ 1.06
VCXQ9H320 AC092667.1-201ENST00000434301 2586 ntBASIC21.69■■□□□ 1.06
VCXQ9H320 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VCXQ9H320 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VCXQ9H320 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
VCXQ9H320 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCXQ9H320 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VCXQ9H320 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.68■■□□□ 1.06
VCXQ9H320 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VCXQ9H320 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCXQ9H320 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.67■■□□□ 1.06
VCXQ9H320 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VCXQ9H320 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.67■■□□□ 1.06
VCXQ9H320 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.67■■□□□ 1.06
VCXQ9H320 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.67■■□□□ 1.06
VCXQ9H320 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCXQ9H320 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCXQ9H320 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VCXQ9H320 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VCXQ9H320 HLA-L-211ENST00000482052 1765 ntBASIC21.66■■□□□ 1.06
VCXQ9H320 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
VCXQ9H320 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VCXQ9H320 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
VCXQ9H320 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCXQ9H320 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCXQ9H320 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.65■■□□□ 1.06
VCXQ9H320 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCXQ9H320 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCXQ9H320 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VCXQ9H320 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VCXQ9H320 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
VCXQ9H320 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCXQ9H320 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VCXQ9H320 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
VCXQ9H320 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
VCXQ9H320 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VCXQ9H320 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCXQ9H320 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VCXQ9H320 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCXQ9H320 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 AC073130.3-201ENST00000624389 2278 ntBASIC21.63■■□□□ 1.05
VCXQ9H320 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VCXQ9H320 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.63■■□□□ 1.05
VCXQ9H320 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms