Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AL138724.1-201ENST00000606771 1088 ntBASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 AC011298.3-201ENST00000615796 283 ntBASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SLC46A1Q96NT5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 IRS3P-201ENST00000223076 1006 ntBASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC46A1Q96NT5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 AC008764.7-201ENST00000593779 1081 ntBASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SLC46A1Q96NT5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC46A1Q96NT5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC46A1Q96NT5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC46A1Q96NT5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SLC46A1Q96NT5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC46A1Q96NT5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC46A1Q96NT5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC46A1Q96NT5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC46A1Q96NT5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC46A1Q96NT5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SLC46A1Q96NT5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC46A1Q96NT5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 AC022211.4-201ENST00000625094 2161 ntBASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC46A1Q96NT5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 AC099791.1-201ENST00000416440 715 ntBASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC46A1Q96NT5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 MIR6089-201ENST00000616698 64 ntBASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 AC131274.2-201ENST00000580697 1507 ntBASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC46A1Q96NT5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 AC142381.3-201ENST00000568208 1670 ntBASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 AC009102.2-201ENST00000606772 1639 ntBASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC46A1Q96NT5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms