Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 AC009102.2-201ENST00000606772 1639 ntBASIC19.75■□□□□ 0.75
SSX8Q7RTT4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 C17orf82-201ENST00000623772 1530 ntBASIC19.75■□□□□ 0.75
SSX8Q7RTT4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 EDA-201ENST00000338901 1233 ntBASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AC135279.3-201ENST00000610945 1311 ntBASIC19.74■□□□□ 0.75
SSX8Q7RTT4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 UNC93B3-201ENST00000308076 687 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 PBX2P1-201ENST00000493219 1291 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AL136162.1-201ENST00000607711 1078 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AC011298.3-201ENST00000615796 283 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 AC005837.3-201ENST00000612163 286 ntBASIC19.71■□□□□ 0.75
SSX8Q7RTT4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 AL355001.2-201ENST00000620617 1191 ntBASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms