Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 AC009102.2-201ENST00000606772 1639 ntBASIC19.75■□□□□ 0.75
SSX8Q7RTT4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 C17orf82-201ENST00000623772 1530 ntBASIC19.75■□□□□ 0.75
SSX8Q7RTT4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 EDA-201ENST00000338901 1233 ntBASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX8Q7RTT4 AC135279.3-201ENST00000610945 1311 ntBASIC19.74■□□□□ 0.75
SSX8Q7RTT4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX8Q7RTT4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 UNC93B3-201ENST00000308076 687 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 PBX2P1-201ENST00000493219 1291 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AL136162.1-201ENST00000607711 1078 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AC011298.3-201ENST00000615796 283 ntBASIC19.72■□□□□ 0.75
SSX8Q7RTT4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX8Q7RTT4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 AC005837.3-201ENST00000612163 286 ntBASIC19.71■□□□□ 0.75
SSX8Q7RTT4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX8Q7RTT4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX8Q7RTT4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 AL355001.2-201ENST00000620617 1191 ntBASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX8Q7RTT4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSX8Q7RTT4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms