Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PPP4R3AQ6IN85 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.91■■□□□ 1.74
PPP4R3AQ6IN85 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 KRT16P3-201ENST00000439127 1283 ntBASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP4R3AQ6IN85 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 AL356441.2-201ENST00000443009 864 ntBASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.89■■□□□ 1.74
PPP4R3AQ6IN85 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
PPP4R3AQ6IN85 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 MIR6724-1-201ENST00000616420 92 ntBASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 MIR6724-2-201ENST00000616483 92 ntBASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 MIR6724-4-201ENST00000617390 92 ntBASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 MIR6724-3-201ENST00000622482 92 ntBASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3AQ6IN85 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 AC005703.6-201ENST00000623265 1329 ntBASIC25.87■■□□□ 1.73
PPP4R3AQ6IN85 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 ABCB10P4-201ENST00000566803 2184 ntBASIC25.86■■□□□ 1.73
PPP4R3AQ6IN85 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3AQ6IN85 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3AQ6IN85 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3AQ6IN85 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.84■■□□□ 1.73
PPP4R3AQ6IN85 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.84■■□□□ 1.73
PPP4R3AQ6IN85 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3AQ6IN85 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3AQ6IN85 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.83■■□□□ 1.72
PPP4R3AQ6IN85 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PPP4R3AQ6IN85 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PPP4R3AQ6IN85 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3AQ6IN85 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3AQ6IN85 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3AQ6IN85 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3AQ6IN85 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3AQ6IN85 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3AQ6IN85 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3AQ6IN85 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3AQ6IN85 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms