Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC37.98■■■■□ 3.67
SNAPC4Q5SXM2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 TERF1P2-201ENST00000583350 1212 ntBASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
SNAPC4Q5SXM2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 IGHV3-19-201ENST00000521488 291 ntBASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 KRT18P14-201ENST00000534205 1250 ntBASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 RAP2CP1-201ENST00000605103 478 ntBASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 GXYLT1P2-201ENST00000433312 1230 ntBASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
SNAPC4Q5SXM2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
SNAPC4Q5SXM2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
SNAPC4Q5SXM2 ESRRAP2-201ENST00000418437 1549 ntBASIC37.95■■■■□ 3.67
SNAPC4Q5SXM2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC37.95■■■■□ 3.67
SNAPC4Q5SXM2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
SNAPC4Q5SXM2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC37.94■■■■□ 3.66
SNAPC4Q5SXM2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC37.94■■■■□ 3.66
SNAPC4Q5SXM2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC37.93■■■■□ 3.66
SNAPC4Q5SXM2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
SNAPC4Q5SXM2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 NTF6G-201ENST00000591094 616 ntBASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
SNAPC4Q5SXM2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 MIR572-201ENST00000384983 95 ntBASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 AC142086.6-201ENST00000621154 1765 ntBASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC37.91■■■■□ 3.66
SNAPC4Q5SXM2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
SNAPC4Q5SXM2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 AL354811.1-201ENST00000610286 706 ntBASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC37.89■■■■□ 3.66
SNAPC4Q5SXM2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
SNAPC4Q5SXM2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC37.88■■■■□ 3.65
SNAPC4Q5SXM2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
SNAPC4Q5SXM2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
SNAPC4Q5SXM2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC37.87■■■■□ 3.65
SNAPC4Q5SXM2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC37.86■■■■□ 3.65
SNAPC4Q5SXM2 KRT18P61-201ENST00000585825 1298 ntBASIC37.86■■■■□ 3.65
SNAPC4Q5SXM2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
SNAPC4Q5SXM2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC37.86■■■■□ 3.65
SNAPC4Q5SXM2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC37.85■■■■□ 3.65
SNAPC4Q5SXM2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 pRNA.6-201ENST00000610482 90 ntBASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 pRNA.5-201ENST00000612139 90 ntBASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 pRNA.11-201ENST00000618423 90 ntBASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 pRNA.13-201ENST00000619112 90 ntBASIC37.84■■■■□ 3.65
SNAPC4Q5SXM2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
SNAPC4Q5SXM2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC37.82■■■■□ 3.64
SNAPC4Q5SXM2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC37.82■■■■□ 3.64
SNAPC4Q5SXM2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms