Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 HES1YOR237W 1305 nt3.66□□□□□ -1.82
SMD1Q02260 MMT2YPL224C 1455 nt3.66□□□□□ -1.82
SMD1Q02260 YHR045WYHR045W 1683 nt3.65□□□□□ -1.82
SMD1Q02260 TRM44YPL030W 1704 nt3.65□□□□□ -1.82
SMD1Q02260 RKM2YDR198C 1440 nt3.65□□□□□ -1.83
SMD1Q02260 GCV1YDR019C 1203 nt3.65□□□□□ -1.83
SMD1Q02260 BUR6YER159C 429 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)CtN(GUU)C 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)FtN(GUU)F 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)GtN(GUU)G 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)KtN(GUU)K 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)LtN(GUU)L 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)N1tN(GUU)N1 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)N2tN(GUU)N2 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)O1tN(GUU)O1 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)O2tN(GUU)O2 74 nt3.65□□□□□ -1.83
SMD1Q02260 tN(GUU)PtN(GUU)P 74 nt3.65□□□□□ -1.83
SMD1Q02260 YHL049CYHL049C 816 nt3.65□□□□□ -1.83
SMD1Q02260 YHR214WYHR214W 612 nt3.65□□□□□ -1.83
SMD1Q02260 RPS31YLR167W 459 nt3.65□□□□□ -1.83
SMD1Q02260 VTA1YLR181C 993 nt3.65□□□□□ -1.83
SMD1Q02260 YAR066WYAR066W 612 nt3.65□□□□□ -1.83
SMD1Q02260 SBE2YDR351W 2595 nt3.65□□□□□ -1.83
SMD1Q02260 TOS4YLR183C 1470 nt3.65□□□□□ -1.83
SMD1Q02260 ORC6YHR118C 1308 nt3.65□□□□□ -1.83
SMD1Q02260 FPK1YNR047W 2682 nt3.65□□□□□ -1.83
SMD1Q02260 YDL109CYDL109C 1944 nt3.64□□□□□ -1.83
SMD1Q02260 PDI1YCL043C 1569 nt3.64□□□□□ -1.83
SMD1Q02260 HUL4YJR036C 2679 nt3.64□□□□□ -1.83
SMD1Q02260 EKI1YDR147W 1605 nt3.64□□□□□ -1.83
SMD1Q02260 snR57snR57 88 nt3.64□□□□□ -1.83
SMD1Q02260 YCR097W-AYCR097W-A 267 nt3.64□□□□□ -1.83
SMD1Q02260 MHO1YJR008W 1017 nt3.64□□□□□ -1.83
SMD1Q02260 YLL059CYLL059C 507 nt3.64□□□□□ -1.83
SMD1Q02260 RPS0BYLR048W 759 nt3.64□□□□□ -1.83
SMD1Q02260 YML119WYML119W 1074 nt3.64□□□□□ -1.83
SMD1Q02260 OAZ1YPL052W 879 nt3.64□□□□□ -1.83
SMD1Q02260 ARR3YPR201W 1215 nt3.64□□□□□ -1.83
SMD1Q02260 MRPL36YBR122C 534 nt3.64□□□□□ -1.83
SMD1Q02260 STB2YMR053C 2553 nt3.64□□□□□ -1.83
SMD1Q02260 SAS10YDL153C 1833 nt3.63□□□□□ -1.83
SMD1Q02260 NOT3YIL038C 2511 nt3.63□□□□□ -1.83
SMD1Q02260 UBC1YDR177W 648 nt3.63□□□□□ -1.83
SMD1Q02260 COQ4YDR204W 1008 nt3.63□□□□□ -1.83
SMD1Q02260 YER133W-AYER133W-A 342 nt3.63□□□□□ -1.83
SMD1Q02260 YER187WYER187W 426 nt3.63□□□□□ -1.83
SMD1Q02260 YPT32YGL210W 669 nt3.63□□□□□ -1.83
SMD1Q02260 SCW4YGR279C 1161 nt3.63□□□□□ -1.83
SMD1Q02260 HSX1tR(CCU)J 72 nt3.63□□□□□ -1.83
SMD1Q02260 CTR3YLR411W 726 nt3.63□□□□□ -1.83
SMD1Q02260 RMI1YPL024W 726 nt3.63□□□□□ -1.83
SMD1Q02260 CBC2YPL178W 627 nt3.63□□□□□ -1.83
SMD1Q02260 HXT4YHR092C 1731 nt3.63□□□□□ -1.83
SMD1Q02260 ALD3YMR169C 1521 nt3.63□□□□□ -1.83
SMD1Q02260 ALD2YMR170C 1521 nt3.63□□□□□ -1.83
SMD1Q02260 GSM1YJL103C 1857 nt3.62□□□□□ -1.83
SMD1Q02260 MKS1YNL076W 1755 nt3.62□□□□□ -1.83
SMD1Q02260 PCL9YDL179W 915 nt3.62□□□□□ -1.83
SMD1Q02260 RPL28YGL103W 450 nt3.62□□□□□ -1.83
SMD1Q02260 NVJ1YHR195W 966 nt3.62□□□□□ -1.83
SMD1Q02260 SPC24YMR117C 642 nt3.62□□□□□ -1.83
SMD1Q02260 DAL82YNL314W 768 nt3.62□□□□□ -1.83
SMD1Q02260 ROX3YBL093C 663 nt3.62□□□□□ -1.83
SMD1Q02260 SOL1YNR034W 966 nt3.62□□□□□ -1.83
SMD1Q02260 YNR068CYNR068C 819 nt3.62□□□□□ -1.83
SMD1Q02260 snR19snR19 568 nt3.62□□□□□ -1.83
SMD1Q02260 MDR1YGR100W 2853 nt3.62□□□□□ -1.83
SMD1Q02260 CUE2YKL090W 1332 nt3.62□□□□□ -1.83
SMD1Q02260 TUB3YML124C 1338 nt3.62□□□□□ -1.83
SMD1Q02260 YHR177WYHR177W 1362 nt3.62□□□□□ -1.83
SMD1Q02260 KCC4YCL024W 3114 nt3.61□□□□□ -1.83
SMD1Q02260 PDR15YDR406W 4590 nt3.61□□□□□ -1.83
SMD1Q02260 YOL097W-AYOL097W-A 186 nt3.61□□□□□ -1.83
SMD1Q02260 ISU2YOR226C 471 nt3.61□□□□□ -1.83
SMD1Q02260 CKS1YBR135W 453 nt3.61□□□□□ -1.83
SMD1Q02260 TIF4632YGL049C 2745 nt3.61□□□□□ -1.83
SMD1Q02260 RTT106YNL206C 1368 nt3.61□□□□□ -1.83
SMD1Q02260 MDM30YLR368W 1797 nt3.61□□□□□ -1.83
SMD1Q02260 APM2YHL019C 1818 nt3.6□□□□□ -1.83
SMD1Q02260 PMT5YDL093W 2232 nt3.6□□□□□ -1.83
SMD1Q02260 LSM6YDR378C 261 nt3.6□□□□□ -1.83
SMD1Q02260 ERD1YDR414C 1089 nt3.6□□□□□ -1.83
SMD1Q02260 UTR4YEL038W 684 nt3.6□□□□□ -1.83
SMD1Q02260 YGL118CYGL118C 438 nt3.6□□□□□ -1.83
SMD1Q02260 PFK1YGR240C 2964 nt3.6□□□□□ -1.83
SMD1Q02260 PRP45YAL032C 1140 nt3.6□□□□□ -1.83
SMD1Q02260 YLR036CYLR036C 612 nt3.6□□□□□ -1.83
SMD1Q02260 SNO1YMR095C 675 nt3.6□□□□□ -1.83
SMD1Q02260 LST8YNL006W 912 nt3.6□□□□□ -1.83
SMD1Q02260 YNG1YOR064C 660 nt3.6□□□□□ -1.83
SMD1Q02260 PDX3YBR035C 687 nt3.6□□□□□ -1.83
SMD1Q02260 NRG2YBR066C 663 nt3.6□□□□□ -1.83
SMD1Q02260 THI22YPR121W 1719 nt3.6□□□□□ -1.83
SMD1Q02260 PRP28YDR243C 1767 nt3.6□□□□□ -1.83
SMD1Q02260 RAD57YDR004W 1383 nt3.6□□□□□ -1.83
SMD1Q02260 TRE1YPL176C 2352 nt3.6□□□□□ -1.83
SMD1Q02260 SSA2YLL024C 1920 nt3.6□□□□□ -1.83
SMD1Q02260 MCH4YOL119C 1506 nt3.6□□□□□ -1.83
SMD1Q02260 LYS2YBR115C 4179 nt3.59□□□□□ -1.83
SMD1Q02260 IZH3YLR023C 1632 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms