Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
PDX1P52945 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDX1P52945 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PDX1P52945 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.09■■□□□ 1.13
PDX1P52945 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PDX1P52945 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.09■■□□□ 1.13
PDX1P52945 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PDX1P52945 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.09■■□□□ 1.13
PDX1P52945 AC138932.3-201ENST00000567634 1902 ntBASIC22.09■■□□□ 1.13
PDX1P52945 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.09■■□□□ 1.13
PDX1P52945 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.09■■□□□ 1.13
PDX1P52945 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDX1P52945 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDX1P52945 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.08■■□□□ 1.13
PDX1P52945 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.08■■□□□ 1.13
PDX1P52945 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.08■■□□□ 1.13
PDX1P52945 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDX1P52945 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDX1P52945 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDX1P52945 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDX1P52945 DUX4L19-201ENST00000557448 1267 ntBASIC22.08■■□□□ 1.13
PDX1P52945 AC092666.2-201ENST00000613287 246 ntBASIC22.08■■□□□ 1.13
PDX1P52945 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PDX1P52945 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDX1P52945 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDX1P52945 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PDX1P52945 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.12
PDX1P52945 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDX1P52945 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
PDX1P52945 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PDX1P52945 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.07■■□□□ 1.12
PDX1P52945 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PDX1P52945 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.07■■□□□ 1.12
PDX1P52945 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 MIR4767-201ENST00000582827 78 ntBASIC22.07■■□□□ 1.12
PDX1P52945 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.07■■□□□ 1.12
PDX1P52945 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.07■■□□□ 1.12
PDX1P52945 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
PDX1P52945 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDX1P52945 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.07■■□□□ 1.12
PDX1P52945 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.06■■□□□ 1.12
PDX1P52945 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
PDX1P52945 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 SYT6-210ENST00000641643 1587 ntBASIC22.06■■□□□ 1.12
PDX1P52945 SLC6A10P-202ENST00000431994 2058 ntBASIC22.06■■□□□ 1.12
PDX1P52945 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDX1P52945 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 MIR5787-201ENST00000611784 55 ntBASIC22.05■■□□□ 1.12
PDX1P52945 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDX1P52945 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.04■■□□□ 1.12
PDX1P52945 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 SERBP1P1-201ENST00000396021 1160 ntBASIC22.04■■□□□ 1.12
PDX1P52945 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 AC091305.1-201ENST00000479476 895 ntBASIC22.04■■□□□ 1.12
PDX1P52945 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.04■■□□□ 1.12
PDX1P52945 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDX1P52945 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDX1P52945 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PDX1P52945 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDX1P52945 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.03■■□□□ 1.12
PDX1P52945 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.03■■□□□ 1.12
PDX1P52945 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.03■■□□□ 1.12
PDX1P52945 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDX1P52945 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDX1P52945 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PDX1P52945 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDX1P52945 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PDX1P52945 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDX1P52945 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.02■■□□□ 1.12
PDX1P52945 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDX1P52945 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PDX1P52945 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms