Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YGL262WYGL262W 528 nt4.24□□□□□ -1.73
CDC40P40968 DOT5YIL010W 648 nt4.24□□□□□ -1.73
CDC40P40968 YJL215CYJL215C 360 nt4.24□□□□□ -1.73
CDC40P40968 TPP1YMR156C 717 nt4.24□□□□□ -1.73
CDC40P40968 YMR315WYMR315W 1050 nt4.24□□□□□ -1.73
CDC40P40968 MRP21YBL090W 534 nt4.24□□□□□ -1.73
CDC40P40968 CSG2YBR036C 1233 nt4.24□□□□□ -1.73
CDC40P40968 CDC9YDL164C 2268 nt4.24□□□□□ -1.73
CDC40P40968 AXL2YIL140W 2472 nt4.23□□□□□ -1.73
CDC40P40968 CLD1YGR110W 1338 nt4.23□□□□□ -1.73
CDC40P40968 PRI2YKL045W 1587 nt4.23□□□□□ -1.73
CDC40P40968 TRK2YKR050W 2670 nt4.23□□□□□ -1.73
CDC40P40968 UTP7YER082C 1665 nt4.23□□□□□ -1.73
CDC40P40968 TEA1YOR337W 2280 nt4.23□□□□□ -1.73
CDC40P40968 SKS1YPL026C 1509 nt4.23□□□□□ -1.73
CDC40P40968 YEL028WYEL028W 462 nt4.23□□□□□ -1.73
CDC40P40968 DAM1YGR113W 1032 nt4.23□□□□□ -1.73
CDC40P40968 MOG1YJR074W 657 nt4.23□□□□□ -1.73
CDC40P40968 PRM9YAR031W 897 nt4.23□□□□□ -1.73
CDC40P40968 YMR147WYMR147W 672 nt4.23□□□□□ -1.73
CDC40P40968 YOR034C-AYOR034C-A 243 nt4.23□□□□□ -1.73
CDC40P40968 ISU2YOR226C 471 nt4.23□□□□□ -1.73
CDC40P40968 snR17bsnR17b 332 nt4.23□□□□□ -1.73
CDC40P40968 NRG2YBR066C 663 nt4.23□□□□□ -1.73
CDC40P40968 MRPS5YBR251W 924 nt4.23□□□□□ -1.73
CDC40P40968 PUS1YPL212C 1635 nt4.23□□□□□ -1.73
CDC40P40968 TEF1YPR080W 1377 nt4.23□□□□□ -1.73
CDC40P40968 TEF2YBR118W 1377 nt4.23□□□□□ -1.73
CDC40P40968 SNT2YGL131C 4212 nt4.22□□□□□ -1.73
CDC40P40968 ADP1YCR011C 3150 nt4.22□□□□□ -1.73
CDC40P40968 MHF2YDL160C-A 243 nt4.22□□□□□ -1.73
CDC40P40968 RPL28YGL103W 450 nt4.22□□□□□ -1.73
CDC40P40968 RFU1YLR073C 603 nt4.22□□□□□ -1.73
CDC40P40968 SNO1YMR095C 675 nt4.22□□□□□ -1.73
CDC40P40968 UBC11YOR339C 471 nt4.22□□□□□ -1.73
CDC40P40968 AVT1YJR001W 1809 nt4.22□□□□□ -1.73
CDC40P40968 GLN4YOR168W 2430 nt4.22□□□□□ -1.73
CDC40P40968 VHC1YBR235W 3363 nt4.22□□□□□ -1.73
CDC40P40968 SPC34YKR037C 888 nt4.21□□□□□ -1.74
CDC40P40968 ORM2YLR350W 651 nt4.21□□□□□ -1.74
CDC40P40968 YBR219CYBR219C 384 nt4.21□□□□□ -1.74
CDC40P40968 GIP4YAL031C 2283 nt4.21□□□□□ -1.74
CDC40P40968 SUL2YLR092W 2682 nt4.21□□□□□ -1.74
CDC40P40968 RDH54YBR073W 2877 nt4.21□□□□□ -1.74
CDC40P40968 TFA1YKL028W 1449 nt4.21□□□□□ -1.74
CDC40P40968 PCL10YGL134W 1302 nt4.21□□□□□ -1.74
CDC40P40968 ADE12YNL220W 1302 nt4.21□□□□□ -1.74
CDC40P40968 PEX29YDR479C 1665 nt4.2□□□□□ -1.74
CDC40P40968 GAS2YLR343W 1668 nt4.2□□□□□ -1.74
CDC40P40968 SYP1YCR030C 2613 nt4.2□□□□□ -1.74
CDC40P40968 RSC6YCR052W 1452 nt4.2□□□□□ -1.74
CDC40P40968 UTR4YEL038W 684 nt4.2□□□□□ -1.74
CDC40P40968 PRE3YJL001W 648 nt4.2□□□□□ -1.74
CDC40P40968 RPA49YNL248C 1248 nt4.2□□□□□ -1.74
CDC40P40968 YBR144CYBR144C 315 nt4.2□□□□□ -1.74
CDC40P40968 DHH1YDL160C 1521 nt4.2□□□□□ -1.74
CDC40P40968 AVT3YKL146W 2079 nt4.2□□□□□ -1.74
CDC40P40968 PHO12YHR215W 1404 nt4.2□□□□□ -1.74
CDC40P40968 PHO11YAR071W 1404 nt4.2□□□□□ -1.74
CDC40P40968 ZRC1YMR243C 1329 nt4.2□□□□□ -1.74
CDC40P40968 MDM30YLR368W 1797 nt4.19□□□□□ -1.74
CDC40P40968 PRO2YOR323C 1371 nt4.19□□□□□ -1.74
CDC40P40968 PRP46YPL151C 1356 nt4.19□□□□□ -1.74
CDC40P40968 PUT2YHR037W 1728 nt4.19□□□□□ -1.74
CDC40P40968 YFL034WYFL034W 3222 nt4.19□□□□□ -1.74
CDC40P40968 MRS3YJL133W 945 nt4.19□□□□□ -1.74
CDC40P40968 RPS1BYML063W 768 nt4.19□□□□□ -1.74
CDC40P40968 CDC21YOR074C 915 nt4.19□□□□□ -1.74
CDC40P40968 LYS21YDL131W 1323 nt4.19□□□□□ -1.74
CDC40P40968 PGM2YMR105C 1710 nt4.18□□□□□ -1.74
CDC40P40968 RMR1YGL250W 726 nt4.18□□□□□ -1.74
CDC40P40968 YGR139WYGR139W 339 nt4.18□□□□□ -1.74
CDC40P40968 KTR2YKR061W 1278 nt4.18□□□□□ -1.74
CDC40P40968 RPS31YLR167W 459 nt4.18□□□□□ -1.74
CDC40P40968 YML119WYML119W 1074 nt4.18□□□□□ -1.74
CDC40P40968 MFM1YPL060W 1242 nt4.18□□□□□ -1.74
CDC40P40968 TGS1YPL157W 948 nt4.18□□□□□ -1.74
CDC40P40968 SET6YPL165C 1122 nt4.18□□□□□ -1.74
CDC40P40968 CDC28YBR160W 897 nt4.18□□□□□ -1.74
CDC40P40968 FMP30YPL103C 1407 nt4.18□□□□□ -1.74
CDC40P40968 MNN1YER001W 2289 nt4.18□□□□□ -1.74
CDC40P40968 CRT10YOL063C 2874 nt4.17□□□□□ -1.74
CDC40P40968 RRP1YDR087C 837 nt4.17□□□□□ -1.74
CDC40P40968 FRA2YGL220W 363 nt4.17□□□□□ -1.74
CDC40P40968 ELO3YLR372W 1038 nt4.17□□□□□ -1.74
CDC40P40968 SCO1YBR037C 888 nt4.17□□□□□ -1.74
CDC40P40968 COA2YPL189C-A 207 nt4.17□□□□□ -1.74
CDC40P40968 YCL021W-AYCL021W-A 378 nt4.17□□□□□ -1.74
CDC40P40968 HOM3YER052C 1584 nt4.17□□□□□ -1.74
CDC40P40968 KRE6YPR159W 2163 nt4.17□□□□□ -1.74
CDC40P40968 CDC15YAR019C 2925 nt4.17□□□□□ -1.74
CDC40P40968 THI7YLR237W 1797 nt4.17□□□□□ -1.74
CDC40P40968 BUD7YOR299W 2241 nt4.17□□□□□ -1.74
CDC40P40968 KIP2YPL155C 2121 nt4.16□□□□□ -1.74
CDC40P40968 MNT2YGL257C 1677 nt4.16□□□□□ -1.74
CDC40P40968 ENT1YDL161W 1365 nt4.16□□□□□ -1.74
CDC40P40968 SEG2YKL105C 3399 nt4.16□□□□□ -1.74
CDC40P40968 RIM15YFL033C 5313 nt4.16□□□□□ -1.74
CDC40P40968 YER067C-AYER067C-A 324 nt4.16□□□□□ -1.74
CDC40P40968 IMP2YMR035W 534 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms