Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NF1P21359 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.8■□□□□ 0.6
NF1P21359 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NF1P21359 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NF1P21359 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NF1P21359 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.79■□□□□ 0.6
NF1P21359 AC092171.4-201ENST00000609130 632 ntBASIC18.79■□□□□ 0.6
NF1P21359 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.79■□□□□ 0.6
NF1P21359 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.79■□□□□ 0.6
NF1P21359 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NF1P21359 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.78■□□□□ 0.6
NF1P21359 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NF1P21359 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.78■□□□□ 0.6
NF1P21359 MIR663A-201ENST00000385250 93 ntBASIC18.78■□□□□ 0.6
NF1P21359 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.78■□□□□ 0.6
NF1P21359 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NF1P21359 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NF1P21359 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NF1P21359 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NF1P21359 GUSBP6-202ENST00000438529 1198 ntBASIC18.77■□□□□ 0.6
NF1P21359 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.77■□□□□ 0.6
NF1P21359 MIR3181-201ENST00000578512 73 ntBASIC18.77■□□□□ 0.6
NF1P21359 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
NF1P21359 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NF1P21359 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NF1P21359 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NF1P21359 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.77■□□□□ 0.59
NF1P21359 AC087239.1-201ENST00000622671 572 ntBASIC18.77■□□□□ 0.59
NF1P21359 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.77■□□□□ 0.59
NF1P21359 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.77■□□□□ 0.59
NF1P21359 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
NF1P21359 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
NF1P21359 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
NF1P21359 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
NF1P21359 MIR6084-201ENST00000622012 110 ntBASIC18.76■□□□□ 0.59
NF1P21359 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NF1P21359 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
NF1P21359 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 C17orf82-201ENST00000623772 1530 ntBASIC18.76■□□□□ 0.59
NF1P21359 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.76■□□□□ 0.59
NF1P21359 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.76■□□□□ 0.59
NF1P21359 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.76■□□□□ 0.59
NF1P21359 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NF1P21359 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.75■□□□□ 0.59
NF1P21359 AC012414.1-201ENST00000556676 535 ntBASIC18.75■□□□□ 0.59
NF1P21359 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NF1P21359 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NF1P21359 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.75■□□□□ 0.59
NF1P21359 AC245100.8-202ENST00000629247 1058 ntBASIC18.75■□□□□ 0.59
NF1P21359 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NF1P21359 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NF1P21359 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NF1P21359 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NF1P21359 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.74■□□□□ 0.59
NF1P21359 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.74■□□□□ 0.59
NF1P21359 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.74■□□□□ 0.59
NF1P21359 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NF1P21359 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.74■□□□□ 0.59
NF1P21359 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NF1P21359 AC016769.1-201ENST00000409132 1010 ntBASIC18.74■□□□□ 0.59
NF1P21359 BX842568.3-201ENST00000418104 571 ntBASIC18.74■□□□□ 0.59
NF1P21359 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NF1P21359 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NF1P21359 AC137761.2-201ENST00000561729 223 ntBASIC18.74■□□□□ 0.59
NF1P21359 AC145350.3-201ENST00000569033 163 ntBASIC18.74■□□□□ 0.59
NF1P21359 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NF1P21359 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
NF1P21359 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.73■□□□□ 0.59
NF1P21359 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.73■□□□□ 0.59
NF1P21359 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.73■□□□□ 0.59
NF1P21359 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NF1P21359 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NF1P21359 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NF1P21359 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.73■□□□□ 0.59
NF1P21359 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
NF1P21359 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NF1P21359 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NF1P21359 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NF1P21359 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.72■□□□□ 0.59
NF1P21359 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.72■□□□□ 0.59
NF1P21359 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.72■□□□□ 0.59
NF1P21359 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms