Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 YPL283W-BYPL283W-B 483 nt5.59□□□□□ -1.51
SIR4P11978 YPR204C-AYPR204C-A 483 nt5.59□□□□□ -1.51
SIR4P11978 ZPR1YGR211W 1461 nt5.59□□□□□ -1.52
SIR4P11978 ODC2YOR222W 924 nt5.58□□□□□ -1.52
SIR4P11978 TFG1YGR186W 2208 nt5.58□□□□□ -1.52
SIR4P11978 DUG1YFR044C 1446 nt5.58□□□□□ -1.52
SIR4P11978 YOL075CYOL075C 3885 nt5.57□□□□□ -1.52
SIR4P11978 AIM7YDR063W 450 nt5.57□□□□□ -1.52
SIR4P11978 API2YDR525W 330 nt5.57□□□□□ -1.52
SIR4P11978 SFK1YKL051W 1062 nt5.57□□□□□ -1.52
SIR4P11978 PDX3YBR035C 687 nt5.57□□□□□ -1.52
SIR4P11978 YPL041CYPL041C 624 nt5.57□□□□□ -1.52
SIR4P11978 YER158CYER158C 1722 nt5.57□□□□□ -1.52
SIR4P11978 MCM2YBL023C 2607 nt5.57□□□□□ -1.52
SIR4P11978 PEP5YMR231W 3090 nt5.57□□□□□ -1.52
SIR4P11978 HNT2YDR305C 654 nt5.56□□□□□ -1.52
SIR4P11978 BUD16YEL029C 939 nt5.56□□□□□ -1.52
SIR4P11978 THS1YIL078W 2205 nt5.56□□□□□ -1.52
SIR4P11978 ABF1YKL112W 2196 nt5.56□□□□□ -1.52
SIR4P11978 VBA1YMR088C 1689 nt5.55□□□□□ -1.52
SIR4P11978 HXT17YNR072W 1695 nt5.55□□□□□ -1.52
SIR4P11978 RPS4BYHR203C 786 nt5.55□□□□□ -1.52
SIR4P11978 RPS4AYJR145C 786 nt5.55□□□□□ -1.52
SIR4P11978 YAL047W-AYAL047W-A 330 nt5.55□□□□□ -1.52
SIR4P11978 MTF1YMR228W 1026 nt5.55□□□□□ -1.52
SIR4P11978 MDY2YOL111C 639 nt5.55□□□□□ -1.52
SIR4P11978 COP1YDL145C 3606 nt5.55□□□□□ -1.52
SIR4P11978 KEX1YGL203C 2190 nt5.55□□□□□ -1.52
SIR4P11978 RIA1YNL163C 3333 nt5.55□□□□□ -1.52
SIR4P11978 DUR1,2YBR208C 5508 nt5.55□□□□□ -1.52
SIR4P11978 COQ4YDR204W 1008 nt5.55□□□□□ -1.52
SIR4P11978 SUP56tL(CAA)A 82 nt5.55□□□□□ -1.52
SIR4P11978 SUP53tL(CAA)C 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)DtL(CAA)D 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)G1tL(CAA)G1 82 nt5.55□□□□□ -1.52
SIR4P11978 SUP54tL(CAA)G2 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)G3tL(CAA)G3 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)KtL(CAA)K 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)LtL(CAA)L 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)MtL(CAA)M 82 nt5.55□□□□□ -1.52
SIR4P11978 tL(CAA)NtL(CAA)N 82 nt5.55□□□□□ -1.52
SIR4P11978 LSO1YJR005C-A 282 nt5.55□□□□□ -1.52
SIR4P11978 RMR1YGL250W 726 nt5.54□□□□□ -1.52
SIR4P11978 RRP46YGR095C 672 nt5.54□□□□□ -1.52
SIR4P11978 CNB1YKL190W 528 nt5.54□□□□□ -1.52
SIR4P11978 FMP46YKR049C 402 nt5.54□□□□□ -1.52
SIR4P11978 YEL045CYEL045C 426 nt5.53□□□□□ -1.52
SIR4P11978 FBP1YLR377C 1047 nt5.53□□□□□ -1.52
SIR4P11978 CLA4YNL298W 2529 nt5.53□□□□□ -1.52
SIR4P11978 PGM2YMR105C 1710 nt5.52□□□□□ -1.53
SIR4P11978 TFC7YOR110W 1308 nt5.52□□□□□ -1.53
SIR4P11978 FAT3YKL187C 2253 nt5.52□□□□□ -1.53
SIR4P11978 YFT2YDR319C 825 nt5.52□□□□□ -1.53
SIR4P11978 RIP1YEL024W 648 nt5.52□□□□□ -1.53
SIR4P11978 MRM2YGL136C 963 nt5.52□□□□□ -1.53
SIR4P11978 MAL13YGR288W 1422 nt5.52□□□□□ -1.53
SIR4P11978 GPP1YIL053W 753 nt5.52□□□□□ -1.53
SIR4P11978 CAB3YKL088W 1716 nt5.52□□□□□ -1.53
SIR4P11978 CHS5YLR330W 2016 nt5.52□□□□□ -1.53
SIR4P11978 GCR1YPL075W 2358 nt5.52□□□□□ -1.53
SIR4P11978 PDR15YDR406W 4590 nt5.51□□□□□ -1.53
SIR4P11978 ARO80YDR421W 2853 nt5.51□□□□□ -1.53
SIR4P11978 SPS22YCL048W 1392 nt5.51□□□□□ -1.53
SIR4P11978 ADY3YDL239C 2373 nt5.51□□□□□ -1.53
SIR4P11978 PHO86YJL117W 936 nt5.51□□□□□ -1.53
SIR4P11978 tK(CUU)CtK(CUU)C 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)D1tK(CUU)D1 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)D2tK(CUU)D2 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)E1tK(CUU)E1 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)E2tK(CUU)E2 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)FtK(CUU)F 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)G1tK(CUU)G1 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)G2tK(CUU)G2 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)G3tK(CUU)G3 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)ItK(CUU)I 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)JtK(CUU)J 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)KtK(CUU)K 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)MtK(CUU)M 73 nt5.5□□□□□ -1.53
SIR4P11978 tK(CUU)PtK(CUU)P 73 nt5.5□□□□□ -1.53
SIR4P11978 COG5YNL051W 1212 nt5.5□□□□□ -1.53
SIR4P11978 NME1NME1 340 nt5.5□□□□□ -1.53
SIR4P11978 YFL052WYFL052W 1398 nt5.49□□□□□ -1.53
SIR4P11978 PHO90YJL198W 2646 nt5.49□□□□□ -1.53
SIR4P11978 BUD25YER014C-A 462 nt5.49□□□□□ -1.53
SIR4P11978 ARC1YGL105W 1131 nt5.49□□□□□ -1.53
SIR4P11978 CDC11YJR076C 1248 nt5.49□□□□□ -1.53
SIR4P11978 AST1YBL069W 1290 nt5.49□□□□□ -1.53
SIR4P11978 SWC3YAL011W 1878 nt5.49□□□□□ -1.53
SIR4P11978 MTR10YOR160W 2919 nt5.48□□□□□ -1.53
SIR4P11978 BOP2YLR267W 1713 nt5.48□□□□□ -1.53
SIR4P11978 IMA3YIL172C 1770 nt5.48□□□□□ -1.53
SIR4P11978 IMA4YJL221C 1770 nt5.48□□□□□ -1.53
SIR4P11978 KIN2YLR096W 3444 nt5.48□□□□□ -1.53
SIR4P11978 SUR2YDR297W 1050 nt5.48□□□□□ -1.53
SIR4P11978 YIL021C-AYIL021C-A 270 nt5.48□□□□□ -1.53
SIR4P11978 EAR1YMR171C 1653 nt5.48□□□□□ -1.53
SIR4P11978 DNF2YDR093W 4839 nt5.48□□□□□ -1.53
SIR4P11978 TFC6YDR362C 2019 nt5.48□□□□□ -1.53
SIR4P11978 HIS4YCL030C 2400 nt5.48□□□□□ -1.53
SIR4P11978 CMR1YDL156W 1569 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms