Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.84■■■■□ 3.17
RAPGEF3O95398 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.84■■■■□ 3.17
RAPGEF3O95398 RAP2CP1-201ENST00000605103 478 ntBASIC34.84■■■■□ 3.17
RAPGEF3O95398 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.84■■■■□ 3.17
RAPGEF3O95398 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
RAPGEF3O95398 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC34.83■■■■□ 3.17
RAPGEF3O95398 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
RAPGEF3O95398 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
RAPGEF3O95398 EMC9-206ENST00000560403 872 ntTSL 2 BASIC34.83■■■■□ 3.17
RAPGEF3O95398 TERF1P2-201ENST00000583350 1212 ntBASIC34.83■■■■□ 3.17
RAPGEF3O95398 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
RAPGEF3O95398 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
RAPGEF3O95398 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
RAPGEF3O95398 MIR572-201ENST00000384983 95 ntBASIC34.82■■■■□ 3.16
RAPGEF3O95398 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.82■■■■□ 3.16
RAPGEF3O95398 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC34.82■■■■□ 3.16
RAPGEF3O95398 GXYLT1P5-201ENST00000614548 1189 ntBASIC34.82■■■■□ 3.16
RAPGEF3O95398 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.82■■■■□ 3.16
RAPGEF3O95398 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
RAPGEF3O95398 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.81■■■■□ 3.16
RAPGEF3O95398 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.81■■■■□ 3.16
RAPGEF3O95398 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.81■■■■□ 3.16
RAPGEF3O95398 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
RAPGEF3O95398 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
RAPGEF3O95398 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
RAPGEF3O95398 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.8■■■■□ 3.16
RAPGEF3O95398 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC34.8■■■■□ 3.16
RAPGEF3O95398 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
RAPGEF3O95398 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.8■■■■□ 3.16
RAPGEF3O95398 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
RAPGEF3O95398 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.79■■■■□ 3.16
RAPGEF3O95398 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC34.79■■■■□ 3.16
RAPGEF3O95398 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC34.79■■■■□ 3.16
RAPGEF3O95398 AC080038.1-201ENST00000611274 1154 ntBASIC34.79■■■■□ 3.16
RAPGEF3O95398 ST7-205ENST00000393446 2114 ntTSL 5 BASIC34.79■■■■□ 3.16
RAPGEF3O95398 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC34.79■■■■□ 3.16
RAPGEF3O95398 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC34.78■■■■□ 3.16
RAPGEF3O95398 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
RAPGEF3O95398 pRNA.6-201ENST00000610482 90 ntBASIC34.78■■■■□ 3.16
RAPGEF3O95398 pRNA.5-201ENST00000612139 90 ntBASIC34.78■■■■□ 3.16
RAPGEF3O95398 pRNA.11-201ENST00000618423 90 ntBASIC34.78■■■■□ 3.16
RAPGEF3O95398 pRNA.13-201ENST00000619112 90 ntBASIC34.78■■■■□ 3.16
RAPGEF3O95398 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
RAPGEF3O95398 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
RAPGEF3O95398 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
RAPGEF3O95398 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.77■■■■□ 3.16
RAPGEF3O95398 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
RAPGEF3O95398 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
RAPGEF3O95398 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC34.77■■■■□ 3.16
RAPGEF3O95398 IGHV3-19-201ENST00000521488 291 ntBASIC34.77■■■■□ 3.16
RAPGEF3O95398 NKILA-201ENST00000613231 537 ntTSL 4 BASIC34.77■■■■□ 3.16
RAPGEF3O95398 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC34.77■■■■□ 3.16
RAPGEF3O95398 SHF-208ENST00000560734 1731 ntTSL 3 BASIC34.77■■■■□ 3.16
RAPGEF3O95398 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC34.77■■■■□ 3.16
RAPGEF3O95398 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
RAPGEF3O95398 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.76■■■■□ 3.16
RAPGEF3O95398 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
RAPGEF3O95398 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC34.76■■■■□ 3.16
RAPGEF3O95398 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC34.76■■■■□ 3.16
RAPGEF3O95398 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
RAPGEF3O95398 AL354811.1-201ENST00000610286 706 ntBASIC34.76■■■■□ 3.16
RAPGEF3O95398 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.76■■■■□ 3.15
RAPGEF3O95398 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.15
RAPGEF3O95398 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
RAPGEF3O95398 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC34.75■■■■□ 3.15
RAPGEF3O95398 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC34.75■■■■□ 3.15
RAPGEF3O95398 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
RAPGEF3O95398 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC34.75■■■■□ 3.15
RAPGEF3O95398 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
RAPGEF3O95398 ERN1-208ENST00000606895 2068 ntBASIC34.75■■■■□ 3.15
RAPGEF3O95398 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.74■■■■□ 3.15
RAPGEF3O95398 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
RAPGEF3O95398 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.74■■■■□ 3.15
RAPGEF3O95398 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
RAPGEF3O95398 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
RAPGEF3O95398 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
RAPGEF3O95398 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
RAPGEF3O95398 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
RAPGEF3O95398 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.73■■■■□ 3.15
RAPGEF3O95398 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
RAPGEF3O95398 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.72■■■■□ 3.15
RAPGEF3O95398 CDCA4P2-201ENST00000441182 718 ntBASIC34.72■■■■□ 3.15
RAPGEF3O95398 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.72■■■■□ 3.15
RAPGEF3O95398 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.72■■■■□ 3.15
RAPGEF3O95398 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
RAPGEF3O95398 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
RAPGEF3O95398 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
RAPGEF3O95398 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
RAPGEF3O95398 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.71■■■■□ 3.15
RAPGEF3O95398 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC34.71■■■■□ 3.15
RAPGEF3O95398 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC34.71■■■■□ 3.15
RAPGEF3O95398 KRT18P61-201ENST00000585825 1298 ntBASIC34.71■■■■□ 3.15
RAPGEF3O95398 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC34.71■■■■□ 3.15
RAPGEF3O95398 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.7■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms