Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.04■□□□□ 0.96
TO15178 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 AC005703.6-201ENST00000623265 1329 ntBASIC21.04■□□□□ 0.96
TO15178 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TO15178 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TO15178 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.03■□□□□ 0.96
TO15178 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TO15178 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TO15178 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TO15178 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TO15178 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.02■□□□□ 0.96
TO15178 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
TO15178 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TO15178 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.02■□□□□ 0.95
TO15178 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.01■□□□□ 0.95
TO15178 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 AL356441.2-201ENST00000443009 864 ntBASIC21.01■□□□□ 0.95
TO15178 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TO15178 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TO15178 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TO15178 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21■□□□□ 0.95
TO15178 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21■□□□□ 0.95
TO15178 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21■□□□□ 0.95
TO15178 GRAMD4P7-201ENST00000578182 1232 ntBASIC21■□□□□ 0.95
TO15178 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21■□□□□ 0.95
TO15178 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TO15178 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
TO15178 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21■□□□□ 0.95
TO15178 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TO15178 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TO15178 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TO15178 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TO15178 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TO15178 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TO15178 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.98■□□□□ 0.95
TO15178 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.98■□□□□ 0.95
TO15178 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TO15178 ABCB10P4-201ENST00000566803 2184 ntBASIC20.97■□□□□ 0.95
TO15178 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TO15178 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TO15178 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TO15178 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.97■□□□□ 0.95
TO15178 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TO15178 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TO15178 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TO15178 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TO15178 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.96■□□□□ 0.95
TO15178 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TO15178 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TO15178 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TO15178 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TO15178 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TO15178 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.95■□□□□ 0.94
TO15178 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TO15178 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TO15178 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
TO15178 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TO15178 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TO15178 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TO15178 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.94■□□□□ 0.94
TO15178 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.94■□□□□ 0.94
TO15178 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TO15178 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.94■□□□□ 0.94
TO15178 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TO15178 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.93■□□□□ 0.94
TO15178 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.93■□□□□ 0.94
TO15178 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TO15178 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TO15178 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TO15178 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TO15178 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms