Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 AC112702.1-201ENST00000623712 366 ntBASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 AC105250.1-201ENST00000509378 2057 ntBASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC22.19■■□□□ 1.14
RIMBP3Q9UFD9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC006001.3-205ENST00000428370 579 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 RN7SL452P-201ENST00000482923 291 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 DNM1P50-201ENST00000565767 508 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC006273.1-201ENST00000606966 861 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC138907.9-201ENST00000623747 986 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC002350.2-201ENST00000623894 1828 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 AC011477.7-201ENST00000617163 1440 ntBASIC22.18■■□□□ 1.14
RIMBP3Q9UFD9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 AP001331.1-201ENST00000413008 1015 ntBASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 COQ10BP2-201ENST00000513804 724 ntBASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RIMBP3Q9UFD9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms