Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 ACTG1P2-201ENST00000415776 1125 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 ACTG1P11-201ENST00000425411 1125 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 AC011742.3-201ENST00000439053 820 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 AC009955.4-201ENST00000597192 544 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 AC138696.2-201ENST00000607376 223 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HDAC6Q9UBN7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 AC011840.2-201ENST00000563063 1520 ntBASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 AC100827.2-201ENST00000563214 1194 ntBASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 RN7SL574P-201ENST00000581512 297 ntBASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 AC005324.6-201ENST00000587972 613 ntBASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HDAC6Q9UBN7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HDAC6Q9UBN7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
HDAC6Q9UBN7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HDAC6Q9UBN7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HDAC6Q9UBN7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HDAC6Q9UBN7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 E2F3P2-201ENST00000447755 1422 ntBASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.64■□□□□ 0.25
HDAC6Q9UBN7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms