Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PDIA3P1-201ENST00000471856 1510 ntBASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CICP16-201ENST00000502609 2813 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC090643.2-201ENST00000623442 2029 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 FLJ16779-201ENST00000612722 7638 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AL035633.1-201ENST00000406139 838 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC112492.5-201ENST00000421897 457 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 HOMER2P2-201ENST00000451621 847 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 TUBB8P4-201ENST00000511806 1324 ntBASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDLIM5Q96HC4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDLIM5Q96HC4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AC023310.1-201ENST00000554836 735 ntBASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 DUX4L46-201ENST00000566845 751 ntBASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 LINC02084-201ENST00000606069 1096 ntBASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.33□□□□□ -0.12
PDLIM5Q96HC4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms