Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC103702.1-201ENST00000548801 2630 ntBASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 MYADML-201ENST00000474610 2147 ntBASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 TSPY25P-201ENST00000429463 745 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CEP164P1-201ENST00000455142 418 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 POU5F1P2-201ENST00000521750 823 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC124068.2-201ENST00000569473 1109 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AL109837.1-201ENST00000603272 613 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 AGGF1P1-201ENST00000509500 2073 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 FRMPD2B-201ENST00000431305 1347 ntBASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE3BQ7Z3V4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AC215219.1-201ENST00000400706 1817 ntBASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 CICP24-201ENST00000605464 2705 ntBASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AC234782.1-201ENST00000451950 919 ntBASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE3BQ7Z3V4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms