Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 KRT8P35-201ENST00000483942 1338 ntBASIC12.97□□□□□ -0.33
RAB3BP20337 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RAB3BP20337 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 AL590627.1-203ENST00000421194 1026 ntBASIC12.97□□□□□ -0.33
RAB3BP20337 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.97□□□□□ -0.33
RAB3BP20337 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.97□□□□□ -0.33
RAB3BP20337 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB3BP20337 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.97□□□□□ -0.33
RAB3BP20337 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.97□□□□□ -0.33
RAB3BP20337 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.97□□□□□ -0.33
RAB3BP20337 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB3BP20337 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB3BP20337 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 AGAP10P-201ENST00000454844 2418 ntBASIC12.97□□□□□ -0.33
RAB3BP20337 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB3BP20337 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RAB3BP20337 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RAB3BP20337 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB3BP20337 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB3BP20337 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 AL136172.1-201ENST00000598590 1394 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 AC072061.1-201ENST00000569710 2234 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 TUBB3P1-201ENST00000405796 1332 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RAB3BP20337 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 RPL37AP1-201ENST00000412502 279 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 AL353779.1-201ENST00000434793 351 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB3BP20337 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.96□□□□□ -0.33
RAB3BP20337 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RAB3BP20337 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.96□□□□□ -0.33
RAB3BP20337 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms