Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 LILRP1-201ENST00000444199 1370 ntBASIC17.07■□□□□ 0.32
ERCC3P19447 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.07■□□□□ 0.32
ERCC3P19447 PDIA3P2-201ENST00000428073 158 ntBASIC17.07■□□□□ 0.32
ERCC3P19447 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.07■□□□□ 0.32
ERCC3P19447 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ERCC3P19447 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.07■□□□□ 0.32
ERCC3P19447 AP000346.4-201ENST00000614827 381 ntBASIC17.07■□□□□ 0.32
ERCC3P19447 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC3P19447 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC3P19447 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC3P19447 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC3P19447 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 PCDHA3-202ENST00000532566 4594 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 AC003102.2-201ENST00000589195 1469 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC3P19447 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ERCC3P19447 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
ERCC3P19447 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 AC015656.1-201ENST00000624209 3578 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ERCC3P19447 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 AC116345.2-201ENST00000512837 523 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC3P19447 SCARNA21-201ENST00000517026 139 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 AC090857.1-201ENST00000527400 390 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 AC012044.1-201ENST00000603431 297 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 NAP1L6-202ENST00000641404 1222 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC3P19447 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 AP000845.1-201ENST00000581677 2131 ntBASIC17.06■□□□□ 0.32
ERCC3P19447 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC3P19447 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC3P19447 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC3P19447 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ERCC3P19447 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC3P19447 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ERCC3P19447 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC3P19447 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC3P19447 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC3P19447 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC3P19447 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ERCC3P19447 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC3P19447 FAM90A7P-201ENST00000382628 1395 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms