Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 AC234782.1-201ENST00000451950 919 ntBASIC14.31□□□□□ -0.12
TNFP01375 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFP01375 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFP01375 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.31□□□□□ -0.12
TNFP01375 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 AF254983.2-201ENST00000612331 135 ntBASIC14.31□□□□□ -0.12
TNFP01375 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TNFP01375 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFP01375 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFP01375 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFP01375 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
TNFP01375 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TNFP01375 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.3□□□□□ -0.12
TNFP01375 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TNFP01375 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFP01375 ELK2AP-201ENST00000392510 1007 ntBASIC14.3□□□□□ -0.12
TNFP01375 KRT18P36-201ENST00000411618 1276 ntBASIC14.3□□□□□ -0.12
TNFP01375 TSPY25P-201ENST00000429463 745 ntBASIC14.3□□□□□ -0.12
TNFP01375 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFP01375 EEF1DP6-201ENST00000449232 372 ntBASIC14.3□□□□□ -0.12
TNFP01375 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFP01375 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 AC008723.1-201ENST00000506922 207 ntBASIC14.3□□□□□ -0.12
TNFP01375 PGAM1P5-201ENST00000548011 764 ntBASIC14.3□□□□□ -0.12
TNFP01375 AC003686.1-201ENST00000550956 1034 ntBASIC14.3□□□□□ -0.12
TNFP01375 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFP01375 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TNFP01375 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFP01375 AL133499.1-201ENST00000596207 608 ntBASIC14.3□□□□□ -0.12
TNFP01375 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 MIR6769A-201ENST00000617340 73 ntBASIC14.3□□□□□ -0.12
TNFP01375 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFP01375 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
TNFP01375 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TNFP01375 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TNFP01375 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFP01375 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFP01375 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms