Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RN7SKP230-201ENST00000365642 335 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 MIR1909-201ENST00000411312 80 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 BAATP1-201ENST00000412284 1225 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 MESTP3-201ENST00000503460 968 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ALG3P1-201ENST00000508806 1114 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 KRT17P8-201ENST00000540749 863 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC106886.1-201ENST00000568660 600 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC006213.4-201ENST00000616184 634 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ENPP7P14-201ENST00000621765 1040 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC011840.2-201ENST00000563063 1520 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC006504.5-208ENST00000588784 2401 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC134312.5-201ENST00000568031 1313 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 MIR658-201ENST00000385210 100 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 ACTG1P3-201ENST00000431775 1114 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC068587.3-201ENST00000526613 355 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 ADAM3B-201ENST00000569937 840 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 MIR5189-201ENST00000577370 114 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC004466.1-201ENST00000599515 1080 ntBASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NEUROD4Q9HD90 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms