Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AC106881.1-201ENST00000605849 3329 ntBASIC17.25■□□□□ 0.35
TRIM47Q96LD4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 RCC2P8-201ENST00000502779 1035 ntBASIC17.25■□□□□ 0.35
TRIM47Q96LD4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 MIR6842-201ENST00000612539 65 ntBASIC17.25■□□□□ 0.35
TRIM47Q96LD4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 CICP11-201ENST00000434745 2827 ntBASIC17.25■□□□□ 0.35
TRIM47Q96LD4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM47Q96LD4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.24■□□□□ 0.35
TRIM47Q96LD4 E2F3P2-201ENST00000447755 1422 ntBASIC17.24■□□□□ 0.35
TRIM47Q96LD4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 HLA-K-203ENST00000430151 1046 ntBASIC17.24■□□□□ 0.35
TRIM47Q96LD4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 AC009779.1-201ENST00000551138 283 ntBASIC17.24■□□□□ 0.35
TRIM47Q96LD4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 DUX4L47-201ENST00000566374 394 ntBASIC17.24■□□□□ 0.35
TRIM47Q96LD4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms