Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 LINC01815-202ENST00000641468 1409 ntBASIC17.96■□□□□ 0.47
RPGRQ92834 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.96■□□□□ 0.47
RPGRQ92834 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPGRQ92834 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.96■□□□□ 0.47
RPGRQ92834 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RPGRQ92834 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.95■□□□□ 0.46
RPGRQ92834 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.95■□□□□ 0.46
RPGRQ92834 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.95■□□□□ 0.46
RPGRQ92834 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 RNA5SP417-201ENST00000516459 108 ntBASIC17.95■□□□□ 0.46
RPGRQ92834 ALG1L13P-202ENST00000519320 584 ntBASIC17.95■□□□□ 0.46
RPGRQ92834 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.95■□□□□ 0.46
RPGRQ92834 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.95■□□□□ 0.46
RPGRQ92834 AC005041.3-201ENST00000606287 649 ntBASIC17.95■□□□□ 0.46
RPGRQ92834 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPGRQ92834 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.95■□□□□ 0.46
RPGRQ92834 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RPGRQ92834 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 LINC00554-201ENST00000564841 3011 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 AC092580.1-201ENST00000433998 658 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 ERP29P1-201ENST00000442902 706 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 DPY19L2P5-201ENST00000456300 331 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 RPL18AP8-201ENST00000486071 528 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.94■□□□□ 0.46
RPGRQ92834 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 ALG1L6P-201ENST00000515248 758 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 AC027237.1-201ENST00000560942 655 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.94■□□□□ 0.46
RPGRQ92834 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.94■□□□□ 0.46
RPGRQ92834 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPGRQ92834 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.94■□□□□ 0.46
RPGRQ92834 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 TEKT4P2-202ENST00000559466 1312 ntBASIC17.94■□□□□ 0.46
RPGRQ92834 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.94■□□□□ 0.46
RPGRQ92834 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPGRQ92834 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPGRQ92834 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPGRQ92834 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.93■□□□□ 0.46
RPGRQ92834 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPGRQ92834 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 RN7SKP109-201ENST00000410592 316 ntBASIC17.93■□□□□ 0.46
RPGRQ92834 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.93■□□□□ 0.46
RPGRQ92834 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.93■□□□□ 0.46
RPGRQ92834 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.93■□□□□ 0.46
RPGRQ92834 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.93■□□□□ 0.46
RPGRQ92834 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPGRQ92834 MIR5196-201ENST00000578146 115 ntBASIC17.93■□□□□ 0.46
RPGRQ92834 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.93■□□□□ 0.46
RPGRQ92834 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.93■□□□□ 0.46
RPGRQ92834 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms