Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC079776.1-201ENST00000401540 1152 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC007551.1-201ENST00000457394 519 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC078819.1-201ENST00000547454 765 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC012085.1-201ENST00000548270 765 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC138466.3-201ENST00000619983 221 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AL354702.1-201ENST00000442006 1960 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AL138725.1-201ENST00000407347 1314 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 PDIA3P1-201ENST00000471856 1510 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ANKRD19P-201ENST00000338192 862 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SNX29P1-201ENST00000548357 1007 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 RN7SL48P-201ENST00000579283 293 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AL603764.1-201ENST00000636452 321 ntBASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIMC1Q8NDZ2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms